Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. MI1205 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. MI1205 plasmid pMI4, complete sequence.
Gene Summary
Adenine Count
6149 bp
Thymine Count
6059 bp
Guanine Count
10235 bp
Cytosine Count
10531 bp
Genome Length
32974 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | K663_RS16480 | A5VA00 | Positive | 3330350 - 3333001 | 93915.6 |
| [protein-pii] uridylyltransferase | K663_RS16485 | Q2GAJ4 | Positive | 3333011 - 3335773 | 103937.0 |
| l,d-transpeptidase | K663_RS16490 | Not Available | Negative | 3335784 - 3336284 | 17967.6 |
| gtp cyclohydrolase ii | K663_RS16495 | P43525 | Negative | 3336281 - 3337339 | 37244.8 |
| exodeoxyribonuclease iii | K663_RS16500 | P27695 | Negative | 3337353 - 3338150 | 30756.6 |
| outer membrane lipoprotein carrier protein lola | K663_RS16505 | Not Available | Negative | 3338426 - 3339064 | 23155.1 |
| dna translocase ftsk | K663_RS16510 | Q8YJB8 | Negative | 3339344 - 3341665 | 84154.6 |
| dmt family transporter | K663_RS16515 | Not Available | Negative | 3341810 - 3342739 | 33043.5 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | K663_RS16520 | Q5NR50 | Negative | 3342950 - 3344110 | 41034.2 |
| ompp1/fadl family transporter | K663_RS16525 | P43838 | Negative | 3344176 - 3345474 | 45800.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
