Sphingobium sp. MI1205

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MI1205
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MI1205

NZ_CP005193.1NZ_CP005189.1NZ_CP005190.1NZ_CP005191.1NZ_CP005188.1NZ_CP005192.1

Gene Summary

Adenine Count

106328 bp

Thymine Count

106789 bp

Guanine Count

178503 bp

Cytosine Count

175534 bp

Genome Length

567154 bp

Protein-coding Genes

521 genes

Non-Coding Genes

7 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication initiator protein aK663_RS22760P60119Positive1 - 111342000.3
ribbon-helix-helix domain-containing proteinK663_RS22765Not AvailableNegative1177 - 149110868.0
para family partition atpaseK663_RS22770Not AvailableNegative1488 - 214122798.1
sprt-like domain-containing proteinK663_RS22775Not AvailableNegative2268 - 290922584.1
type ii toxin-antitoxin system relb/dinj family antitoxinK663_RS22780A0A140ND86Positive3324 - 360510314.4
type ii toxin-antitoxin system yafq family toxinK663_RS22785Not AvailablePositive3574 - 389412212.5
helix-turn-helix domain-containing proteinK663_RS22790Not AvailablePositive3930 - 434914875.6
dna-binding transcriptional regulatorK663_RS22795Not AvailablePositive4401 - 45625947.41
hypothetical proteinK663_RS22800Not AvailablePositive4576 - 47827667.98
hypothetical proteinK663_RS24725Not AvailablePositive4769 - 506510456.6

Displaying genes 1 – 10 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

103 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001130L-rhamnono-1,4-lactoneC6H10O5Chemical structure of L-rhamnono-1,4-lactoneNot available
Average162.141Da
Monoisotopic162.052823422Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 103 metabolites

Health Effects

No health effects information available for this bacterium.