Sphingobium sp. MI1205

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MI1205
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MI1205 plasmid pMI4, complete sequence.

Gene Summary

Adenine Count

6149 bp

Thymine Count

6059 bp

Guanine Count

10235 bp

Cytosine Count

10531 bp

Genome Length

32974 bp

Protein-coding Genes

45 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rlme family rna methyltransferaseK663_RS15290Q2GB53Negative3086864 - 308753824356.5
ppx/gppa phosphatase family proteinK663_RS15295L7N5A6Negative3087535 - 308865339205.3
mth938-like domain-containing proteinK663_RS15300Not AvailableNegative3088786 - 308916313524.4
protein translocase subunit secfK663_RS15305O33568Negative3089181 - 309016735696.8
protein translocase subunit secdK663_RS15310O33517Negative3090186 - 309178456797.4
preprotein translocase subunit yajcK663_RS15315Q2YNM1Negative3091792 - 309212711966.8
Trna-proNot AvailableNot AvailablePositive3092314 - 3092390Not Available
hypothetical proteinK663_RS15325Not AvailableNegative3092570 - 30927888060.07
hypothetical proteinK663_RS25090Not AvailablePositive3093131 - 30932655271.44
alkylphosphonate utilization proteinK663_RS15335Not AvailableNegative3093438 - 309374611190.2

Displaying genes 4281 – 4290 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm0001428chlorohydroquinoneC6H5ClO2Chemical structure of chlorohydroquinoneNot available
Average144.55Da
Monoisotopic143.9978071Da
BASm0004795(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateC6H5O4Chemical structure of (2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateNot available
Average141.103Da
Monoisotopic141.019332221Da
BASm00096175-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateC6H4ClO4Chemical structure of 5-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateNot available
Average175.54Da
Monoisotopic174.9803599Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.