Sphingobium sp. MI1205

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MI1205
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MI1205 plasmid pMI4, complete sequence.

Gene Summary

Adenine Count

6149 bp

Thymine Count

6059 bp

Guanine Count

10235 bp

Cytosine Count

10531 bp

Genome Length

32974 bp

Protein-coding Genes

45 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldK663_RS13735A5VAA8Negative2784339 - 278523230907.7
duf167 family proteinK663_RS13740B5ZTD4Negative2785229 - 278555812035.5
yggt family proteinK663_RS13745Q8U530Negative2785555 - 278584510818.0
acetylglutamate kinaseK663_RS13750A5VAE6Negative2785954 - 278685931383.2
ppx/gppa family phosphataseK663_RS13755B2VG72Negative2787098 - 278861254205.1
rna degradosome polyphosphate kinaseK663_RS13760Q2NC49Negative2788620 - 279075879903.7
hypothetical proteinK663_RS13765Not AvailableNegative2790775 - 279140122700.0
hypothetical proteinK663_RS13770Not AvailableNegative2791398 - 279268745655.5
phosphoribosylformylglycinamidine cyclo-ligaseK663_RS13775Q2G9X9Positive2792779 - 279387337924.3
phosphoribosylglycinamide formyltransferaseK663_RS13780Q59A32Positive2793936 - 279488634720.7

Displaying genes 4001 – 4010 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm0001428chlorohydroquinoneC6H5ClO2Chemical structure of chlorohydroquinoneNot available
Average144.55Da
Monoisotopic143.9978071Da
BASm0004795(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateC6H5O4Chemical structure of (2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateNot available
Average141.103Da
Monoisotopic141.019332221Da
BASm00096175-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateC6H4ClO4Chemical structure of 5-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateNot available
Average175.54Da
Monoisotopic174.9803599Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.