Sphingobium sp. MI1205

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MI1205
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MI1205 plasmid pMI4, complete sequence.

Gene Summary

Adenine Count

6149 bp

Thymine Count

6059 bp

Guanine Count

10235 bp

Cytosine Count

10531 bp

Genome Length

32974 bp

Protein-coding Genes

45 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanine--d-alanine ligaseK663_RS12085Q2G992Negative2473194 - 247415334250.9
udp-n-acetylmuramate dehydrogenaseK663_RS12090Q1GRY1Negative2474150 - 247507932557.2
udp-n-acetylmuramate--l-alanine ligaseK663_RS12095A5VDC5Negative2475129 - 247655050267.4
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseK663_RS12100Q9RNM6Negative2476547 - 247771341561.6
ftsw/roda/spove family cell cycle proteinK663_RS12105B8H092Negative2477710 - 247891243621.8
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseK663_RS12110Q2G997Negative2478947 - 248026946103.0
phospho-n-acetylmuramoyl-pentapeptide- transferaseK663_RS12115A5VDC9Negative2480275 - 248134838748.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseK663_RS12120O33804Negative2481348 - 248272447419.7
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseK663_RS12125Q9RNM2Negative2482721 - 248416350456.1
penicillin-binding protein 2K663_RS12130B8H0A0Negative2484165 - 248587761730.8

Displaying genes 3671 – 3680 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm0001428chlorohydroquinoneC6H5ClO2Chemical structure of chlorohydroquinoneNot available
Average144.55Da
Monoisotopic143.9978071Da
BASm0004795(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateC6H5O4Chemical structure of (2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateNot available
Average141.103Da
Monoisotopic141.019332221Da
BASm00096175-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateC6H4ClO4Chemical structure of 5-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateNot available
Average175.54Da
Monoisotopic174.9803599Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.