Sphingobium sp. MI1205

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MI1205
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MI1205 plasmid pMI4, complete sequence.

Gene Summary

Adenine Count

6149 bp

Thymine Count

6059 bp

Guanine Count

10235 bp

Cytosine Count

10531 bp

Genome Length

32974 bp

Protein-coding Genes

45 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine kinaseK663_RS10860Not AvailablePositive2251742 - 225345163126.1
response regulator transcription factorK663_RS10865P66798Positive2253448 - 225410423373.5
duf1467 family proteinK663_RS10870Not AvailableNegative2254311 - 22545719661.78
ribonuclease jK663_RS10875M4MR97Negative2254583 - 225622058263.3
type iii pantothenate kinaseK663_RS10880Q2G601Negative2256220 - 225699927844.8
biotin--[acetyl-coa-carboxylase] ligaseK663_RS10885P29906Negative2257017 - 225767623010.0
nadh-quinone oxidoreductase subunit nuonK663_RS10890A5VAN3Negative2257721 - 225915749405.4
nadh-quinone oxidoreductase subunit mK663_RS10895P50974Negative2259157 - 226072857134.3
nadh-quinone oxidoreductase subunit lK663_RS10900P29924Negative2260728 - 226284276752.6
nadh-quinone oxidoreductase subunit nuokK663_RS10905Q1GTK9Negative2262850 - 226315510868.0

Displaying genes 3441 – 3450 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm0001428chlorohydroquinoneC6H5ClO2Chemical structure of chlorohydroquinoneNot available
Average144.55Da
Monoisotopic143.9978071Da
BASm0004795(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateC6H5O4Chemical structure of (2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateNot available
Average141.103Da
Monoisotopic141.019332221Da
BASm00096175-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateC6H4ClO4Chemical structure of 5-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateNot available
Average175.54Da
Monoisotopic174.9803599Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.