Sphingobium sp. MI1205

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MI1205
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MI1205 plasmid pMI4, complete sequence.

Gene Summary

Adenine Count

6149 bp

Thymine Count

6059 bp

Guanine Count

10235 bp

Cytosine Count

10531 bp

Genome Length

32974 bp

Protein-coding Genes

45 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine hydrolase family proteinK663_RS04325Not AvailableNegative911701 - 91229421168.4
nrtr dna-binding winged helix domain-containing proteinK663_RS04330Not AvailablePositive912434 - 91310524637.6
spfh domain-containing proteinK663_RS04335Not AvailablePositive913102 - 91408835929.9
nad(+)/nadh kinaseK663_RS04340Not AvailablePositive914096 - 91498932520.6
nicotinate phosphoribosyltransferaseK663_RS04345Q1QI14Positive915000 - 91630449555.0
hypothetical proteinK663_RS04350Not AvailablePositive916524 - 91787649395.2
duf302 domain-containing proteinK663_RS04355Not AvailablePositive918316 - 91870214069.9
shoct domain-containing proteinK663_RS04360Not AvailablePositive918809 - 91913211758.3
ferric reductase-like transmembrane domain-containing proteinK663_RS04365Not AvailablePositive919255 - 92053247180.0
cytochrome b/b6 domain-containing proteinK663_RS04375Not AvailablePositive921056 - 92172123993.8

Displaying genes 2121 – 2130 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm0001428chlorohydroquinoneC6H5ClO2Chemical structure of chlorohydroquinoneNot available
Average144.55Da
Monoisotopic143.9978071Da
BASm0004795(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateC6H5O4Chemical structure of (2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoateNot available
Average141.103Da
Monoisotopic141.019332221Da
BASm00096175-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateC6H4ClO4Chemical structure of 5-chlorocarbonyl-4-hydroxy-penta-2,4-dienoateNot available
Average175.54Da
Monoisotopic174.9803599Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.