Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yhhn | SAMN05421827_10964 | Not Available | Positive | 2995090 - 2995782 | 26538.5 |
| penicillin-binding protein 1c | SAMN05421827_10965 | Not Available | Negative | 2996659 - 2999031 | 88786.0 |
| transposase is200 like | SAMN05421827_10966 | Not Available | Negative | 2999156 - 2999704 | 22069.3 |
| hypothetical protein | SAMN05421827_10967 | Not Available | Negative | 2999830 - 3005421 | 207644.0 |
| protein of unknown function | SAMN05421827_10968 | Not Available | Positive | 3005634 - 3006071 | 16171.9 |
| hypothetical protein | SAMN05421827_10969 | Not Available | Negative | 3006512 - 3006922 | 15141.4 |
| dna topoisomerase-1 | SAMN05421827_10970 | Not Available | Negative | 3007016 - 3009580 | 96347.4 |
| glutathione peroxidase | SAMN05421827_10971 | Not Available | Positive | 3010150 - 3010662 | 19271.4 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN05421827_10972 | Not Available | Negative | 3011083 - 3011919 | 31397.4 |
| dna-binding transcriptional regulator, marr family | SAMN05421827_10973 | Not Available | Negative | 3011966 - 3012409 | 16905.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
