Rhizobium leguminosarum bv. trifolii WSM2304

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium leguminosarum bv. trifolii WSM2304 is a gram-negative, rod-shaped bacterium that thrives in mesophilic temperature ranges, functioning as a chemotroph and displaying facultative anaerobic characteristics. This strain primarily colonizes the root nodules of legumes such as clover, contributing significantly to biological nitrogen fixation, a vital process that enriches soil quality and enhances plant growth. As a gram-negative organism, *R. leguminosarum* possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which plays a crucial role in its interactions with plant hosts and environmental adaptability. The rod shape of the bacterium allows for efficient motility and colonization of root surfaces, facilitating the establishment of symbiotic relationships with plant roots. Preferring mesophilic temperatures, this microbe optimally grows in temperate conditions, which are typically found in its natural habitats such as agricultural soils. As a chemotroph, *R. leguminosarum* derives its energy from chemical compounds rather than light, embodying the essence of nitrogen-fixing bacteria that convert atmospheric nitrogen into ammonia, thereby making nitrogen accessible to plants. Furthermore, its facultative anaerobic nature enables it to adapt to varying oxygen levels, thriving in both oxygen-rich environments and low-oxygen conditions within root nodules. This particular strain, WSM2304, is noteworthy for its unique ability to form effective symbiotic relationships with host plants, optimizing nitrogen fixation and supporting sustainable agricultural practices. Additionally, it is known to enhance the resistance of clover plants to various pathogens, underscoring its potential contributions to crop resilience and soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium leguminosarum
StrainWSM2304

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium leguminosarum bv. trifolii WSM2304
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Trifolium polymorphum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Rhizobium leguminosarum bv. trifolii WSM2304


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3933 genes

Non-Coding Genes

536 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorRLEG2_RS22005Not AvailablePositive125 - 81124893.0
atp-binding proteinRLEG2_RS22010Not AvailablePositive814 - 210346760.4
efflux transporter outer membrane subunitRLEG2_RS22015Not AvailablePositive2219 - 367051224.4
hpch/hpai aldolase/citrate lyase family proteinRLEG2_RS22020Not AvailableNegative3681 - 451729643.6
maoc family dehydrataseRLEG2_RS22025Not AvailableNegative4514 - 496616729.1
acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alphaRLEG2_RS22030Not AvailableNegative4966 - 683166209.0
carboxyl transferase domain-containing proteinRLEG2_RS22035Not AvailableNegative6839 - 844957425.9
isovaleryl-coa dehydrogenaseRLEG2_RS22040Not AvailableNegative8446 - 959141155.6
type ii toxin-antitoxin system phd/yefm family antitoxinRLEG2_RS22045Not AvailablePositive9747 - 100079968.65
hypothetical proteinRLEG2_RS22050Not AvailablePositive9997 - 1041615935.1

Displaying genes 1 – 10 of 6661 in total

Metabolites

1877 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 1877 metabolites

Health Effects

No health effects information available for this bacterium.