Chitinophaga ginsengisegetis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga ginsengisegetis is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This microbe thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the Chitinophaga genus, it is likely involved in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of fungi. The non-spore-forming nature of Chitinophaga ginsengisegetis suggests that it may rely on its aerobic capabilities to survive and compete in its ecological niche, potentially affecting organic matter decomposition and nutrient cycling within its habitat. Furthermore, its Gram-negative cell wall structure may confer specific advantages in terms of environmental adaptability and resistance to certain antimicrobial agents, although the implications of this trait require further investigation. Given its optimal growth temperature of 25.0°C, Chitinophaga ginsengisegetis may inhabit temperate environments where such conditions are prevalent. This bacterium could play a significant role in the microbiome of soil or decaying organic matter, contributing to the breakdown of complex organic materials. Understanding its ecological role may provide insights into the broader implications of chitinolytic bacteria in nutrient dynamics within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga ginsengisegetis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga ginsengisegetis strain DSM 18108 genome assembly,

Gene Summary

Adenine Count

2112075 bp

Thymine Count

2120842 bp

Guanine Count

1815377 bp

Cytosine Count

1885384 bp

Genome Length

7934943 bp

Protein-coding Genes

6301 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad dependent oxidoreductaseSAMN05660461_5244Not AvailablePositive6477238 - 647951484359.7
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN05660461_5245Not AvailableNegative6479669 - 648075741067.4
hypothetical proteinSAMN05660461_5246Not AvailablePositive6480780 - 648107911178.5
predicted atpaseSAMN05660461_5247Not AvailableNegative6481076 - 648182527742.3
carbonic anhydraseSAMN05660461_5248Not AvailableNegative6481863 - 648263328091.0
uncharacterized conserved proteinSAMN05660461_5249Not AvailableNegative6482793 - 648409446180.2
exodeoxyribonuclease-3SAMN05660461_5251Not AvailableNegative6484478 - 648525129582.1
tigr02453 family proteinSAMN05660461_5252Not AvailablePositive6485419 - 648612027107.3
methyltransferase domain-containing proteinSAMN05660461_5253Not AvailablePositive6486181 - 648681023533.5
hypothetical proteinSAMN05660461_5254Not AvailablePositive6486854 - 648733318534.2

Displaying genes 5201 – 5210 of 6376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.