Chitinophaga ginsengisegetis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga ginsengisegetis is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This microbe thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the Chitinophaga genus, it is likely involved in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of fungi. The non-spore-forming nature of Chitinophaga ginsengisegetis suggests that it may rely on its aerobic capabilities to survive and compete in its ecological niche, potentially affecting organic matter decomposition and nutrient cycling within its habitat. Furthermore, its Gram-negative cell wall structure may confer specific advantages in terms of environmental adaptability and resistance to certain antimicrobial agents, although the implications of this trait require further investigation. Given its optimal growth temperature of 25.0°C, Chitinophaga ginsengisegetis may inhabit temperate environments where such conditions are prevalent. This bacterium could play a significant role in the microbiome of soil or decaying organic matter, contributing to the breakdown of complex organic materials. Understanding its ecological role may provide insights into the broader implications of chitinolytic bacteria in nutrient dynamics within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga ginsengisegetis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga ginsengisegetis strain DSM 18108 genome assembly,

Gene Summary

Adenine Count

2112075 bp

Thymine Count

2120842 bp

Guanine Count

1815377 bp

Cytosine Count

1885384 bp

Genome Length

7934943 bp

Protein-coding Genes

6301 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad dependent oxidoreductaseSAMN05660461_4958Not AvailablePositive6105483 - 610749273208.9
rna polymerase sigma-70 factor, ecf subfamilySAMN05660461_4959Not AvailablePositive6107572 - 610811121101.3
fecr family proteinSAMN05660461_4960Not AvailablePositive6108153 - 610928341683.5
beta-galactosidaseSAMN05660461_4961Not AvailablePositive6109366 - 6113436150893.0
dna modification methylaseSAMN05660461_4962Not AvailablePositive6113572 - 611479246916.6
cfrbi restriction endonucleaseSAMN05660461_4963Not AvailablePositive6114803 - 611600845293.4
hypothetical proteinSAMN05660461_4964Not AvailablePositive6116084 - 611685129070.6
hypothetical proteinSAMN05660461_4965Not AvailablePositive6116914 - 611760325242.7
doxx proteinSAMN05660461_4966Not AvailableNegative6117735 - 611811213837.1
uncharacterized conserved protein yndb, ahsa1/start domainSAMN05660461_4967Not AvailableNegative6118186 - 611868919000.7

Displaying genes 4921 – 4930 of 6376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.