Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga ginsengisegetis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2112075 bp
Thymine Count
2120842 bp
Guanine Count
1815377 bp
Cytosine Count
1885384 bp
Genome Length
7934943 bp
Protein-coding Genes
6301 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | SAMN05660461_4030 | Not Available | Negative | 5025162 - 5025728 | 21666.0 |
| predicted zn-dependent peptidase | SAMN05660461_4031 | Not Available | Negative | 5025858 - 5028797 | 110090.0 |
| hypothetical protein | SAMN05660461_4032 | Not Available | Negative | 5028953 - 5029294 | 12548.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05660461_4033 | Not Available | Negative | 5029324 - 5030262 | 35542.6 |
| hypothetical protein | SAMN05660461_4034 | Not Available | Negative | 5030282 - 5031349 | 38303.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660461_4035 | Not Available | Negative | 5031373 - 5031858 | 19228.2 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN05660461_4036 | Not Available | Positive | 5032241 - 5033428 | 43358.9 |
| beta-lactamase class d | SAMN05660461_4037 | Not Available | Positive | 5033598 - 5034407 | 31463.2 |
| ca-activated chloride channel family protein | SAMN05660461_4038 | Not Available | Positive | 5034556 - 5035575 | 37910.0 |
| tpr repeat-containing protein | SAMN05660461_4039 | Not Available | Positive | 5035586 - 5036380 | 30406.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
