Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga ginsengisegetis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2112075 bp
Thymine Count
2120842 bp
Guanine Count
1815377 bp
Cytosine Count
1885384 bp
Genome Length
7934943 bp
Protein-coding Genes
6301 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660461_3749 | Not Available | Negative | 4708236 - 4708838 | 23459.2 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN05660461_3750 | Not Available | Negative | 4709056 - 4709691 | 23451.1 |
| hypothetical protein | SAMN05660461_3751 | Not Available | Negative | 4710069 - 4710695 | 24135.7 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05660461_3752 | Not Available | Positive | 4710835 - 4711839 | 38413.9 |
| hypothetical protein | SAMN05660461_3753 | Not Available | Negative | 4711902 - 4712621 | 26282.9 |
| adenine deaminase | SAMN05660461_3754 | Not Available | Positive | 4712733 - 4714373 | 58742.5 |
| anhydro-n-acetylmuramic acid kinase | SAMN05660461_3755 | Not Available | Negative | 4714430 - 4715521 | 39356.2 |
| ca-activated chloride channel family protein | SAMN05660461_3756 | Not Available | Positive | 4715623 - 4717539 | 69464.9 |
| uracil phosphoribosyltransferase | SAMN05660461_3757 | Not Available | Positive | 4717583 - 4718236 | 23965.8 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05660461_3758 | Not Available | Positive | 4718406 - 4719419 | 37758.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
