Chitinophaga ginsengisegetis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga ginsengisegetis is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This microbe thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the Chitinophaga genus, it is likely involved in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of fungi. The non-spore-forming nature of Chitinophaga ginsengisegetis suggests that it may rely on its aerobic capabilities to survive and compete in its ecological niche, potentially affecting organic matter decomposition and nutrient cycling within its habitat. Furthermore, its Gram-negative cell wall structure may confer specific advantages in terms of environmental adaptability and resistance to certain antimicrobial agents, although the implications of this trait require further investigation. Given its optimal growth temperature of 25.0°C, Chitinophaga ginsengisegetis may inhabit temperate environments where such conditions are prevalent. This bacterium could play a significant role in the microbiome of soil or decaying organic matter, contributing to the breakdown of complex organic materials. Understanding its ecological role may provide insights into the broader implications of chitinolytic bacteria in nutrient dynamics within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga ginsengisegetis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga ginsengisegetis strain DSM 18108 genome assembly,

Gene Summary

Adenine Count

2112075 bp

Thymine Count

2120842 bp

Guanine Count

1815377 bp

Cytosine Count

1885384 bp

Genome Length

7934943 bp

Protein-coding Genes

6301 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad dependent oxidoreductaseSAMN05660461_3342Not AvailableNegative4206052 - 420769560889.3
lysophospholipase l1SAMN05660461_3343Not AvailableNegative4207692 - 420841727006.6
dna-binding transcriptional regulator, fadr familySAMN05660461_3344Not AvailablePositive4208687 - 420934024744.7
hypothetical proteinSAMN05660461_3345Not AvailablePositive4209351 - 421018428789.2
uncharacterized membrane proteinSAMN05660461_3346Not AvailablePositive4210195 - 421059014235.9
acyl-coa hydrolaseSAMN05660461_3347Not AvailableNegative4210593 - 421098514837.9
n-acetylglucosamine-6-phosphate deacetylaseSAMN05660461_3348Not AvailableNegative4211016 - 421220642428.3
glucosamine-6-phosphate deaminaseSAMN05660461_3349Not AvailableNegative4212210 - 421295927029.5
tat (twin-arginine translocation) pathway signal sequenceSAMN05660461_3350Not AvailableNegative4212986 - 421442853895.5
acetyl xylan esterase (axe1)SAMN05660461_3351Not AvailableNegative4214447 - 421646873561.4

Displaying genes 3321 – 3330 of 6376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.