Chitinophaga ginsengisegetis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga ginsengisegetis is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This microbe thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the Chitinophaga genus, it is likely involved in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of fungi. The non-spore-forming nature of Chitinophaga ginsengisegetis suggests that it may rely on its aerobic capabilities to survive and compete in its ecological niche, potentially affecting organic matter decomposition and nutrient cycling within its habitat. Furthermore, its Gram-negative cell wall structure may confer specific advantages in terms of environmental adaptability and resistance to certain antimicrobial agents, although the implications of this trait require further investigation. Given its optimal growth temperature of 25.0°C, Chitinophaga ginsengisegetis may inhabit temperate environments where such conditions are prevalent. This bacterium could play a significant role in the microbiome of soil or decaying organic matter, contributing to the breakdown of complex organic materials. Understanding its ecological role may provide insights into the broader implications of chitinolytic bacteria in nutrient dynamics within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga ginsengisegetis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga ginsengisegetis strain DSM 18108 genome assembly,

Gene Summary

Adenine Count

2112075 bp

Thymine Count

2120842 bp

Guanine Count

1815377 bp

Cytosine Count

1885384 bp

Genome Length

7934943 bp

Protein-coding Genes

6301 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripeptide aminopeptidaseSAMN05660461_3111Not AvailableNegative3931585 - 393279344056.3
methionine synthase (b12-independent)SAMN05660461_3112Not AvailablePositive3933027 - 393531885896.5
cysteine-rich cwcSAMN05660461_3113Not AvailablePositive3935399 - 39355937523.07
peptidylprolyl isomeraseSAMN05660461_3114Not AvailableNegative3935665 - 393614717580.3
uncharacterized conserved protein ybbc, duf1343 familySAMN05660461_3115Not AvailablePositive3936198 - 393736443331.7
methionyl-trna formyltransferaseSAMN05660461_3116Not AvailablePositive3937462 - 393836132972.7
lysm domain-containing proteinSAMN05660461_3117Not AvailableNegative3938564 - 393953534764.5
16s rrna c967 or c1407 c5-methylase, rsmb/rsmf familySAMN05660461_3118Not AvailableNegative3939745 - 394114852436.7
nad(p) transhydrogenase subunit betaSAMN05660461_3119Not AvailableNegative3941404 - 394287051344.0
nad(p) transhydrogenase subunit alphaSAMN05660461_3120Not AvailableNegative3942965 - 394327611190.3

Displaying genes 3091 – 3100 of 6376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.