Roseobacter litoralis Och 149

Gram-negativeRodMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseobacter

Description

Roseobacter litoralis Och 149.This type strain for the species was collected from seaweed and isolated by direct plating. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseobacter
SpeciesRoseobacter litoralis
StrainOch 149

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Roseobacter litoralis Och 149
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhototroph - Photosynthetic
PathogenicityNot Available

Genome Summary

Roseobacter litoralis Och 149 plasmid pRLO149_63, complete

Gene Summary

Adenine Count

14020 bp

Thymine Count

14418 bp

Guanine Count

17652 bp

Cytosine Count

17442 bp

Genome Length

63532 bp

Protein-coding Genes

52 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinRLO149_RS08270Not AvailableNegative1747858 - 174891337360.2
extracellular solute-binding proteinRLO149_RS08275Not AvailableNegative1748948 - 175000337939.6
gntr family transcriptional regulatorRLO149_RS08280Not AvailableNegative1750148 - 175081324891.9
abc transporter permeaseRLO149_RS08285Not AvailableNegative1751309 - 175212728897.5
abc transporter permeaseRLO149_RS08290Not AvailableNegative1752124 - 175305633440.2
abc transporter atp-binding proteinRLO149_RS08295Not AvailableNegative1753056 - 175413539016.9
abc transporter substrate-binding proteinRLO149_RS08300Not AvailableNegative1754132 - 175518137222.6
deor/glpr family dna-binding transcription regulatorRLO149_RS08305Not AvailableNegative1755344 - 175614128438.6
sis domain-containing proteinRLO149_RS08310Not AvailablePositive1756260 - 175737238838.3
carbohydrate kinase family proteinRLO149_RS08315Not AvailablePositive1757374 - 175839634897.2

Displaying genes 1881 – 1890 of 4549 in total

Metabolites

1691 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1691 metabolites

Health Effects

No health effects information available for this bacterium.