Roseobacter litoralis Och 149

Gram-negativeRodMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseobacter

Description

Roseobacter litoralis Och 149.This type strain for the species was collected from seaweed and isolated by direct plating. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseobacter
SpeciesRoseobacter litoralis
StrainOch 149

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Roseobacter litoralis Och 149
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhototroph - Photosynthetic
PathogenicityNot Available

Genome Summary

Roseobacter litoralis Och 149, complete sequence.

Gene Summary

Adenine Count

964466 bp

Thymine Count

963486 bp

Guanine Count

1287397 bp

Cytosine Count

1289862 bp

Genome Length

4505211 bp

Protein-coding Genes

4253 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aaa family atpaseRLO149_RS22540Not AvailablePositive101 - 149251395.7
parb/repb/spo0j family partition proteinRLO149_RS22545Not AvailablePositive1619 - 259335460.7
vplpa-cterm sorting domain-containing proteinRLO149_RS22550Not AvailableNegative2881 - 357924074.4
vplpa-cterm sorting domain-containing proteinRLO149_RS22555Not AvailableNegative3977 - 456720059.7
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseRLO149_RS22560Not AvailableNegative4908 - 632350551.0
vplpa-cterm-specific exosortase xrtdRLO149_RS22565Not AvailablePositive6574 - 817860040.6
transposaseRLO149_RS24440Not AvailableNegative8542 - 938631171.8
transposaseRLO149_RS23390Not AvailableNegative9622 - 1030324351.1
transposaseRLO149_RS22590Not AvailablePositive11015 - 1224044943.3
transposaseRLO149_RS23485Not AvailableNegative12306 - 1273715989.6

Displaying genes 1 – 10 of 4549 in total

Metabolites

1695 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1695 metabolites

Health Effects

No health effects information available for this bacterium.