Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | C0Z19_00115 | Not Available | Negative | 26720 - 28525 | 62009.2 |
| hypothetical protein | C0Z19_00120 | Not Available | Positive | 29008 - 29937 | 34854.9 |
| plp-dependent aminotransferase family protein | C0Z19_00125 | Not Available | Positive | 29995 - 31200 | 43712.4 |
| hypothetical protein | C0Z19_00130 | Not Available | Positive | 31303 - 31995 | 25700.6 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | C0Z19_00135 | Not Available | Negative | 32067 - 33539 | 52176.4 |
| tartrate dehydrogenase | C0Z19_00140 | Not Available | Negative | 33690 - 34778 | 39815.5 |
| asnc family transcriptional regulator | C0Z19_00145 | Not Available | Negative | 34920 - 35411 | 18529.6 |
| aspartate aminotransferase family protein | C0Z19_00150 | Not Available | Negative | 35455 - 36852 | 49612.2 |
| glyoxylate/hydroxypyruvate reductase a | C0Z19_00155 | Not Available | Negative | 37011 - 37937 | 34338.6 |
| gnat family n-acetyltransferase | C0Z19_00160 | Not Available | Negative | 37961 - 38821 | 31149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
