Trinickia soli str. GP25-8

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Trinickia

Description

Trinickia soli strain GP25-8 is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions, with an optimal growth temperature of 29.0°C. This microbe is primarily isolated from soil environments, indicating its adaptation to terrestrial habitats where it likely plays a role in nutrient cycling and soil health. The Gram-negative nature of Trinickia soli GP25-8 suggests that it possesses a complex outer membrane structure, which may confer certain advantages in terms of environmental resilience and interactions with other soil microorganisms. The rod shape is typical of many soil bacteria and may contribute to its motility and ability to colonize various niches within the soil matrix. Given its specific growth temperature, Trinickia soli GP25-8 may be particularly well-suited to temperate climates, where it can contribute to the microbial diversity and functionality of soil ecosystems. Understanding the physiological traits of this strain could provide insights into its potential roles in soil ecology, including its interactions with plants and other soil-dwelling microorganisms. This could further illuminate the importance of Trinickia soli GP25-8 in maintaining soil health and ecosystem balance in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusTrinickia
SpeciesTrinickia soli
StrainGP25-8

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Nicotiana tabacum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trinickia soli strain GP25-8

Gene Summary

Adenine Count

1132447 bp

Thymine Count

1126675 bp

Guanine Count

1902158 bp

Cytosine Count

1934929 bp

Genome Length

6096209 bp

Protein-coding Genes

5327 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homoprotocatechuate degradation operon regulator hparC0Z19_00060Not AvailableNegative15885 - 1628615223.6
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseC0Z19_00065Not AvailablePositive16468 - 1722926379.0
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseC0Z19_00070Not AvailablePositive17226 - 1798427852.2
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseC0Z19_00075Not AvailablePositive18000 - 1945752399.6
3,4-dihydroxyphenylacetate 2,3-dioxygenaseC0Z19_00080Not AvailablePositive19518 - 2038131935.1
5-carboxymethyl-2-hydroxymuconate isomeraseC0Z19_00085Not AvailablePositive20402 - 2080014518.4
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseC0Z19_00090Not AvailablePositive20875 - 2167829225.2
hypothetical proteinC0Z19_00095Not AvailablePositive21770 - 2208111191.9
ggdef domain-containing proteinC0Z19_00100Not AvailableNegative22102 - 2351750179.4
dihydroxy-acid dehydrataseC0Z19_00110Not AvailablePositive24694 - 2655665634.7

Displaying genes 71 – 80 of 5423 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.