Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 3395 - 3507 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3743 - 5279 | Not Available |
| cyclic di-gmp phosphodiesterase | C0Z19_00020 | Not Available | Positive | 3757 - 5760 | 74051.4 |
| enoyl-coa hydratase | C0Z19_00025 | Not Available | Negative | 5801 - 6667 | 32584.6 |
| cystine abc transporter substrate-binding protein | C0Z19_00030 | Not Available | Negative | 7062 - 7874 | 29353.4 |
| hypothetical protein | C0Z19_00035 | Not Available | Positive | 8071 - 9192 | 38010.9 |
| glycogen debranching enzyme glgx | C0Z19_00040 | Not Available | Negative | 9454 - 11643 | 82085.2 |
| universal stress protein | C0Z19_00045 | Not Available | Negative | 11718 - 12674 | 34091.9 |
| heavy metal translocating p-type atpase | C0Z19_00050 | Not Available | Positive | 12840 - 15131 | 79950.6 |
| lysine transporter lyse | C0Z19_00055 | Not Available | Negative | 15166 - 15783 | 21881.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
