Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | C0Z19_23450 | Not Available | Negative | 5160163 - 5161350 | 42603.5 |
| lipid a biosynthesis lauroyl acyltransferase | C0Z19_23455 | Not Available | Positive | 5161665 - 5162552 | 33766.1 |
| diaminopimelate epimerase | C0Z19_23460 | Not Available | Positive | 5162599 - 5163471 | 30920.2 |
| duf484 domain-containing protein | C0Z19_23465 | Not Available | Positive | 5163529 - 5164317 | 28336.6 |
| tyrosine recombinase xerc | C0Z19_23470 | Not Available | Positive | 5164376 - 5165284 | 32731.5 |
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | C0Z19_23475 | Not Available | Positive | 5165355 - 5166587 | 44432.0 |
| cobalamin biosynthesis protein cobw | C0Z19_23480 | Not Available | Positive | 5166802 - 5167893 | 40796.5 |
| rna polymerase-binding protein dksa | C0Z19_23485 | Not Available | Positive | 5168361 - 5168780 | 16154.3 |
| hslu--hslv peptidase proteolytic subunit | C0Z19_23490 | Not Available | Positive | 5169229 - 5169765 | 19017.9 |
| hslu--hslv peptidase atpase subunit | C0Z19_23495 | Not Available | Positive | 5169782 - 5171125 | 49489.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
