Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | C0Z19_21185 | Not Available | Negative | 4680695 - 4683397 | 96706.8 |
| thioredoxin reductase | C0Z19_21190 | Not Available | Positive | 4683602 - 4685329 | 60032.2 |
| argininosuccinate synthase | C0Z19_21195 | Not Available | Positive | 4685531 - 4686865 | 49342.8 |
| 3-deoxy-7-phosphoheptulonate synthase | C0Z19_21200 | Not Available | Positive | 4687026 - 4688144 | 40526.5 |
| hypothetical protein | C0Z19_21205 | Not Available | Positive | 4688452 - 4691472 | 104467.0 |
| hypothetical protein | C0Z19_21210 | Not Available | Negative | 4691525 - 4692115 | 19941.9 |
| d-(-)-3-hydroxybutyrate oligomer hydrolase | C0Z19_21215 | Not Available | Negative | 4692361 - 4694484 | 73282.2 |
| lysr family transcriptional regulator | C0Z19_21220 | Not Available | Negative | 4694755 - 4695672 | 33482.6 |
| hydroxymethylglutaryl-coa lyase | C0Z19_21225 | Not Available | Positive | 4695840 - 4696796 | 33687.6 |
| formyl-coa transferase | C0Z19_21230 | Not Available | Positive | 4696793 - 4697944 | 41638.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
