Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | C0Z19_21120 | Not Available | Negative | 4666955 - 4668685 | 64226.5 |
| sulfate transporter subunit | C0Z19_21130 | Not Available | Negative | 4669219 - 4670250 | 37623.2 |
| hypothetical protein | C0Z19_21135 | Not Available | Negative | 4670340 - 4670591 | 9290.13 |
| sulfate abc transporter permease subunit cyst | C0Z19_21140 | Not Available | Positive | 4670662 - 4671558 | 31859.5 |
| sulfate abc transporter permease subunit cysw | C0Z19_21145 | Not Available | Positive | 4671555 - 4672475 | 32431.9 |
| sulfate abc transporter atp-binding protein | C0Z19_21150 | Not Available | Positive | 4672489 - 4673547 | 38161.8 |
| mbl fold metallo-hydrolase | C0Z19_21160 | Not Available | Negative | 4673763 - 4674641 | 32454.3 |
| lysr family transcriptional regulator | C0Z19_21170 | Not Available | Negative | 4675495 - 4676370 | 31697.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | C0Z19_21175 | Not Available | Positive | 4676603 - 4679188 | 92805.9 |
| mfs transporter | C0Z19_21180 | Not Available | Negative | 4679329 - 4680555 | 42098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
