Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | C0Z19_21065 | Not Available | Negative | 4655915 - 4658408 | 91941.6 |
| succinate dehydrogenase, cytochrome b556 subunit | C0Z19_21070 | Not Available | Negative | 4658409 - 4658652 | 9125.43 |
| transcriptional regulator | C0Z19_21075 | Not Available | Positive | 4658885 - 4659784 | 32200.0 |
| atp-dependent rna helicase dbpa | C0Z19_21080 | Not Available | Positive | 4660104 - 4661507 | 51430.0 |
| hypothetical protein | C0Z19_21090 | Not Available | Negative | 4662117 - 4662443 | 11481.7 |
| pbs lyase | C0Z19_21095 | Not Available | Negative | 4662440 - 4663435 | 35455.3 |
| sulfonate abc transporter atp-binding protein | C0Z19_21100 | Not Available | Negative | 4663432 - 4664289 | 31058.9 |
| abc transporter permease | C0Z19_21105 | Not Available | Negative | 4664286 - 4665137 | 29855.0 |
| nitrate abc transporter substrate-binding protein | C0Z19_21110 | Not Available | Negative | 4665222 - 4666649 | 51179.9 |
| 4fe-4s ferredoxin | C0Z19_21115 | Not Available | Negative | 4666697 - 4666942 | 9040.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
