Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C0Z19_21015 | Not Available | Positive | 4644586 - 4646025 | 51271.9 |
| hypothetical protein | C0Z19_21020 | Not Available | Negative | 4646145 - 4646429 | 9720.22 |
| hypothetical protein | C0Z19_21025 | Not Available | Positive | 4646873 - 4647157 | 9885.48 |
| lipid a export permease/atp-binding protein msba | C0Z19_21030 | Not Available | Negative | 4647188 - 4648969 | 64763.2 |
| glycosyltransferase family 2 protein | C0Z19_21035 | Not Available | Positive | 4649176 - 4649976 | 29245.7 |
| glycosyl transferase | C0Z19_21040 | Not Available | Positive | 4650061 - 4650909 | 31907.1 |
| glycosyl transferase | C0Z19_21045 | Not Available | Negative | 4651008 - 4651934 | 34436.2 |
| ligase | C0Z19_21050 | Not Available | Negative | 4651919 - 4653250 | 47435.8 |
| heptosyltransferase | C0Z19_21055 | Not Available | Negative | 4653480 - 4654613 | 42109.8 |
| lps core biosynthesis protein | C0Z19_21060 | Not Available | Negative | 4654765 - 4655874 | 40469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
