Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein cpab | C0Z19_20965 | Not Available | Positive | 4634897 - 4635895 | 34057.8 |
| fimbrial protein | C0Z19_20970 | Not Available | Positive | 4635895 - 4637337 | 50591.0 |
| hypothetical protein | C0Z19_20975 | Not Available | Positive | 4637350 - 4637766 | 14329.2 |
| pilus assembly protein cpae | C0Z19_20980 | Not Available | Positive | 4637774 - 4638988 | 43976.1 |
| secretion system protein e | C0Z19_20985 | Not Available | Positive | 4638988 - 4640475 | 54421.5 |
| pilus assembly protein | C0Z19_20990 | Not Available | Positive | 4640472 - 4641443 | 35086.8 |
| fimbrial protein | C0Z19_20995 | Not Available | Positive | 4641446 - 4642378 | 33429.8 |
| hypothetical protein | C0Z19_21000 | Not Available | Positive | 4642375 - 4643496 | 39237.6 |
| hypothetical protein | C0Z19_21005 | Not Available | Positive | 4643493 - 4643978 | 17564.6 |
| hypothetical protein | C0Z19_21010 | Not Available | Positive | 4644029 - 4644589 | 20008.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
