Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | C0Z19_20915 | Not Available | Positive | 4626664 - 4627392 | 26169.8 |
| phosphoribosylamine--glycine ligase | C0Z19_20920 | Not Available | Positive | 4627411 - 4628685 | 45255.4 |
| nicotinate-nucleotide adenylyltransferase | C0Z19_20925 | Not Available | Positive | 4629467 - 4630486 | 36188.1 |
| ribosome silencing factor | C0Z19_20930 | Not Available | Positive | 4630489 - 4631046 | 19963.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C0Z19_20935 | Not Available | Positive | 4631069 - 4631539 | 17593.4 |
| septum formation inhibitor maf | C0Z19_20940 | Not Available | Positive | 4631590 - 4632225 | 22600.2 |
| ribonuclease g | C0Z19_20945 | Not Available | Positive | 4632237 - 4633700 | 54662.7 |
| hypothetical protein | C0Z19_20950 | Not Available | Negative | 4633768 - 4633968 | 7772.61 |
| flp family type ivb pilin | C0Z19_20955 | Not Available | Positive | 4634124 - 4634318 | 6698.27 |
| hypothetical protein | C0Z19_20960 | Not Available | Positive | 4634393 - 4634878 | 16706.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
