Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | C0Z19_19550 | Not Available | Positive | 4345901 - 4346776 | 30552.2 |
| dna-binding response regulator | C0Z19_19555 | Not Available | Positive | 4346773 - 4347429 | 24241.6 |
| amino acid permease | C0Z19_19560 | Not Available | Positive | 4347658 - 4349055 | 48734.9 |
| carbon monoxide dehydrogenase | C0Z19_19565 | Not Available | Positive | 4349348 - 4349914 | 19838.1 |
| hypothetical protein | C0Z19_19570 | Not Available | Positive | 4349887 - 4350915 | 36638.2 |
| type vi secretion system baseplate subunit tssg | C0Z19_19575 | Not Available | Negative | 4351021 - 4352127 | 41578.8 |
| type vi secretion system baseplate subunit tssf | C0Z19_19580 | Not Available | Negative | 4352091 - 4353932 | 67557.0 |
| type vi secretion system baseplate subunit tssf | C0Z19_19585 | Not Available | Negative | 4353955 - 4356021 | 75254.7 |
| type vi secretion system tip protein vgrg | C0Z19_19590 | Not Available | Positive | 4356160 - 4358730 | 94132.8 |
| hypothetical protein | C0Z19_19595 | Not Available | Positive | 4358764 - 4359936 | 44212.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
