Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | C0Z19_19035 | Not Available | Negative | 4234824 - 4236848 | 70862.8 |
| type vi secretion system-associated protein tagf | C0Z19_19040 | Not Available | Negative | 4236915 - 4237583 | 23891.1 |
| type vi secretion system membrane subunit tssm | C0Z19_19045 | Not Available | Negative | 4237565 - 4241167 | 131265.0 |
| type vi secretion system protein tssl | C0Z19_19050 | Not Available | Negative | 4241182 - 4242384 | 43926.4 |
| type vi secretion system baseplate subunit tssk | C0Z19_19055 | Not Available | Negative | 4242532 - 4243902 | 50908.5 |
| type vi secretion system lipoprotein tssj | C0Z19_19060 | Not Available | Negative | 4243899 - 4244435 | 19802.7 |
| hypothetical protein | C0Z19_19065 | Not Available | Positive | 4244894 - 4245178 | 10714.7 |
| type vi secretion system-associated fha domain protein tagh | C0Z19_19070 | Not Available | Positive | 4245231 - 4246538 | 46933.5 |
| serine/threonine-protein phosphatase | C0Z19_19075 | Not Available | Positive | 4246535 - 4247293 | 27024.7 |
| aromatic amino acid aminotransferase | C0Z19_19080 | Not Available | Negative | 4247335 - 4248528 | 44138.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
