Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein c | C0Z19_18735 | Not Available | Negative | 4161458 - 4162174 | 27350.4 |
| pyrroloquinoline quinone biosynthesis protein pqqb | C0Z19_18740 | Not Available | Negative | 4162192 - 4163115 | 32524.1 |
| pyrroloquinoline quinone precursor peptide pqqa | C0Z19_18745 | Not Available | Negative | 4163189 - 4163263 | 2926.51 |
| sigma-54-dependent fis family transcriptional regulator | C0Z19_18750 | Not Available | Negative | 4163609 - 4165621 | 72604.7 |
| hypothetical protein | C0Z19_18755 | Not Available | Negative | 4165847 - 4166077 | 8436.4 |
| pqq-dependent dehydrogenase, methanol/ethanol family | C0Z19_18760 | Not Available | Positive | 4166593 - 4168320 | 61971.9 |
| cytochrome c | C0Z19_18765 | Not Available | Positive | 4168442 - 4169731 | 44469.6 |
| aldehyde dehydrogenase | C0Z19_18770 | Not Available | Positive | 4169991 - 4171517 | 55597.8 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | C0Z19_18775 | Not Available | Positive | 4171874 - 4173067 | 42694.7 |
| cellulose synthase | C0Z19_18780 | Not Available | Positive | 4173134 - 4175437 | 80455.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
