Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | C0Z19_18535 | Not Available | Positive | 4111436 - 4112824 | 48633.6 |
| hypothetical protein | C0Z19_18540 | Not Available | Negative | 4112879 - 4114201 | 49963.5 |
| thiamine pyrophosphate-binding protein | C0Z19_18545 | Not Available | Positive | 4114200 - 4115906 | 61352.3 |
| tetratricopeptide repeat protein | C0Z19_18550 | Not Available | Positive | 4116150 - 4117877 | 63642.0 |
| duf2784 domain-containing protein | C0Z19_18555 | Not Available | Negative | 4117907 - 4118287 | 14122.7 |
| eama family transporter | C0Z19_18560 | Not Available | Positive | 4118874 - 4119758 | 30787.9 |
| farnesyl-diphosphate farnesyltransferase | C0Z19_18565 | Not Available | Positive | 4119896 - 4120978 | 39392.2 |
| lysine transporter lyse | C0Z19_18570 | Not Available | Positive | 4121160 - 4121792 | 22205.0 |
| hypothetical protein | C0Z19_18575 | Not Available | Negative | 4121842 - 4122243 | 14797.7 |
| oxidoreductase | C0Z19_18580 | Not Available | Negative | 4122413 - 4123492 | 38956.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
