Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | C0Z19_17290 | Not Available | Negative | 3830123 - 3831199 | 38046.1 |
| shikimate kinase | C0Z19_17295 | Not Available | Negative | 3831196 - 3831747 | 20471.7 |
| type iv pilus secretin pilq | C0Z19_17300 | Not Available | Negative | 3831853 - 3833493 | 57412.8 |
| hypothetical protein | C0Z19_17305 | Not Available | Negative | 3833490 - 3834440 | 33305.9 |
| hypothetical protein | C0Z19_17310 | Not Available | Negative | 3834437 - 3835102 | 23923.5 |
| pilus assembly protein pilm | C0Z19_17315 | Not Available | Negative | 3835099 - 3835923 | 28442.5 |
| penicillin-binding protein | C0Z19_17320 | Not Available | Positive | 3836137 - 3838569 | 87280.5 |
| iron donor protein cyay | C0Z19_17325 | Not Available | Negative | 3838696 - 3839013 | 11853.8 |
| hypothetical protein | C0Z19_17330 | Not Available | Positive | 3839067 - 3839366 | 9716.49 |
| diaminopimelate decarboxylase | C0Z19_17335 | Not Available | Positive | 3839381 - 3840640 | 44934.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
