Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | C0Z19_16885 | Not Available | Positive | 3751301 - 3751897 | 21074.8 |
| dioxygenase | C0Z19_16890 | Not Available | Positive | 3752045 - 3752827 | 28365.8 |
| amino acid:proton symporter | C0Z19_16895 | Not Available | Negative | 3753027 - 3754619 | 58079.4 |
| cold-shock protein | C0Z19_16900 | Not Available | Positive | 3755063 - 3755266 | 7375.73 |
| heat-shock protein | C0Z19_16905 | Not Available | Negative | 3755403 - 3756662 | 45466.0 |
| mfs transporter | C0Z19_16910 | Not Available | Positive | 3756869 - 3758422 | 55866.1 |
| mfs transporter | C0Z19_16915 | Not Available | Negative | 3758549 - 3759838 | 45415.1 |
| tetr family transcriptional regulator | C0Z19_16920 | Not Available | Positive | 3760092 - 3760754 | 23678.8 |
| duf1415 domain-containing protein | C0Z19_16925 | Not Available | Positive | 3760797 - 3761390 | 22662.7 |
| sam-dependent methyltransferase | C0Z19_16930 | Not Available | Negative | 3761510 - 3762346 | 31270.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
