Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | C0Z19_16575 | Not Available | Negative | 3684317 - 3685069 | 27415.1 |
| transcriptional regulator | C0Z19_16580 | Not Available | Positive | 3685340 - 3686134 | 29292.9 |
| rna polymerase subunit sigma-24 | C0Z19_16585 | Not Available | Positive | 3686262 - 3686852 | 21542.9 |
| hypothetical protein | C0Z19_16590 | Not Available | Positive | 3686931 - 3687770 | 29612.7 |
| argininosuccinate lyase | C0Z19_16595 | Not Available | Positive | 3687951 - 3689354 | 51384.8 |
| hypothetical protein | C0Z19_16600 | Not Available | Negative | 3689435 - 3690337 | 31110.2 |
| lysine decarboxylase | C0Z19_16605 | Not Available | Negative | 3690340 - 3692619 | 84906.2 |
| dctp deaminase | C0Z19_16610 | Not Available | Negative | 3692745 - 3693314 | 21449.4 |
| superoxide dismutase family protein | C0Z19_16615 | Not Available | Negative | 3693338 - 3693883 | 18418.8 |
| iron-sulfur cluster carrier protein apbc | C0Z19_16620 | Not Available | Negative | 3694037 - 3695125 | 38070.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
