Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C0Z19_15300 | Not Available | Negative | 3405741 - 3406661 | 33356.4 |
| rida family protein | C0Z19_15305 | Not Available | Positive | 3406769 - 3407173 | 14107.7 |
| fad-dependent oxidoreductase | C0Z19_15310 | Not Available | Positive | 3407231 - 3408508 | 46530.2 |
| aldehyde dehydrogenase family protein | C0Z19_15315 | Not Available | Positive | 3408505 - 3409962 | 51474.5 |
| d-amino-acid oxidase | C0Z19_15320 | Not Available | Negative | 3410029 - 3411354 | 47093.5 |
| hypothetical protein | C0Z19_15325 | Not Available | Negative | 3411357 - 3412076 | 25626.3 |
| haloacid dehalogenase type ii | C0Z19_15330 | Not Available | Negative | 3412151 - 3412819 | 25330.4 |
| alanine racemase | C0Z19_15335 | Not Available | Negative | 3413095 - 3414225 | 40744.6 |
| hypothetical protein | C0Z19_15340 | Not Available | Negative | 3414489 - 3416294 | 64717.6 |
| eama family transporter | C0Z19_15350 | Not Available | Positive | 3417280 - 3418137 | 28869.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
