Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate abc transporter atp-binding protein | C0Z19_15035 | Not Available | Positive | 3346288 - 3347148 | 31315.3 |
| sulfatase | C0Z19_15040 | Not Available | Positive | 3347247 - 3348614 | 51468.0 |
| sulfatase-modifying factor 1 | C0Z19_15045 | Not Available | Positive | 3348688 - 3349584 | 32693.0 |
| transporter | C0Z19_15050 | Not Available | Positive | 3349655 - 3351160 | 52811.4 |
| aminoglycoside phosphotransferase | C0Z19_15055 | Not Available | Negative | 3351256 - 3352923 | 62102.1 |
| antitoxin of toxin-antitoxin stability system | C0Z19_15060 | Not Available | Positive | 3353367 - 3353621 | 9474.15 |
| vapc toxin family pin domain ribonuclease | C0Z19_15065 | Not Available | Positive | 3353609 - 3354031 | 15474.6 |
| hypothetical protein | C0Z19_15070 | Not Available | Negative | 3354281 - 3354466 | 6963.34 |
| type vi secretion system baseplate subunit tssf | C0Z19_15075 | Not Available | Negative | 3354466 - 3356316 | 67481.1 |
| hypothetical protein | C0Z19_15080 | Not Available | Positive | 3356922 - 3357114 | 7380.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
