Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C0Z19_14880 | Not Available | Positive | 3309422 - 3310159 | 26813.6 |
| iclr family transcriptional regulator | C0Z19_14885 | Not Available | Negative | 3310255 - 3311070 | 29602.2 |
| fad-binding oxidoreductase | C0Z19_14890 | Not Available | Positive | 3311512 - 3312927 | 51739.6 |
| gaba permease | C0Z19_14895 | Not Available | Positive | 3313159 - 3314586 | 50825.6 |
| (fe-s)-binding protein | C0Z19_14905 | Not Available | Positive | 3317702 - 3318439 | 26556.4 |
| dmso reductase | C0Z19_14910 | Not Available | Positive | 3318570 - 3319517 | 33373.0 |
| 2-aminoadipate aminotransferase | C0Z19_14915 | Not Available | Negative | 3319566 - 3321098 | 57207.4 |
| rna polymerase subunit sigma-70 | C0Z19_14920 | Not Available | Negative | 3321553 - 3322815 | 45081.0 |
| hypothetical protein | C0Z19_14925 | Not Available | Negative | 3322812 - 3323183 | 13519.8 |
| tonb-dependent siderophore receptor | C0Z19_14930 | Not Available | Positive | 3323527 - 3325782 | 80394.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
