Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | C0Z19_14455 | Not Available | Positive | 3203265 - 3204665 | 51609.7 |
| hypothetical protein | C0Z19_14460 | Not Available | Positive | 3204725 - 3205510 | 28057.9 |
| gntr family transcriptional regulator | C0Z19_14465 | Not Available | Negative | 3205602 - 3206288 | 25372.7 |
| antibiotic biosynthesis monooxygenase | C0Z19_14470 | Not Available | Positive | 3206350 - 3206673 | 12172.2 |
| rna chaperone hfq | C0Z19_14475 | Not Available | Negative | 3206733 - 3207224 | 18065.9 |
| hypothetical protein | C0Z19_14480 | Not Available | Positive | 3207240 - 3207506 | 9741.37 |
| fad-binding oxidoreductase | C0Z19_14485 | Not Available | Positive | 3207585 - 3209162 | 57621.9 |
| hypothetical protein | C0Z19_14490 | Not Available | Positive | 3209234 - 3209722 | 17299.0 |
| long-chain fatty acid--coa ligase | C0Z19_14495 | Not Available | Negative | 3209726 - 3211549 | 66544.6 |
| acyl-coa dehydrogenase | C0Z19_14500 | Not Available | Negative | 3211683 - 3214244 | 92391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
