Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | C0Z19_14130 | Not Available | Positive | 3120120 - 3120683 | 19053.9 |
| pilus assembly protein pilm | C0Z19_14135 | Not Available | Positive | 3120754 - 3121236 | 16641.8 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C0Z19_14140 | Not Available | Positive | 3121223 - 3122977 | 59760.8 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C0Z19_14145 | Not Available | Positive | 3123185 - 3124924 | 59689.7 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | C0Z19_14150 | Not Available | Positive | 3125104 - 3126780 | 59363.4 |
| sensor histidine kinase | C0Z19_14155 | Not Available | Positive | 3126777 - 3127928 | 40536.5 |
| dna-binding response regulator | C0Z19_14160 | Not Available | Positive | 3127960 - 3128754 | 29261.9 |
| hypothetical protein | C0Z19_14165 | Not Available | Positive | 3128751 - 3130241 | 52933.3 |
| hypothetical protein | C0Z19_14170 | Not Available | Positive | 3130514 - 3134428 | 125176.0 |
| autotransporter strand-loop-strand o-heptosyltransferase | C0Z19_14175 | Not Available | Negative | 3134546 - 3135862 | 49071.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
