Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mosc domain-containing protein | C0Z19_13665 | Not Available | Negative | 2992879 - 2993748 | 31234.1 |
| rod shape-determining protein | C0Z19_13670 | Not Available | Negative | 2993931 - 2994968 | 35894.4 |
| abc transporter | C0Z19_13675 | Not Available | Positive | 2995267 - 2996850 | 58106.0 |
| l,d-transpeptidase | C0Z19_13680 | Not Available | Negative | 2996882 - 2997787 | 32545.5 |
| peptidase s1 | C0Z19_13685 | Not Available | Negative | 2998098 - 2999759 | 60336.4 |
| peptidase s53 | C0Z19_13690 | Not Available | Negative | 2999936 - 3001546 | 54856.2 |
| duf1993 domain-containing protein | C0Z19_13695 | Not Available | Positive | 3001970 - 3002479 | 18971.8 |
| lyse family translocator | C0Z19_13700 | Not Available | Negative | 3002572 - 3003210 | 22474.2 |
| hypothetical protein | C0Z19_13705 | Not Available | Negative | 3003388 - 3003618 | 8888.45 |
| hypothetical protein | C0Z19_13710 | Not Available | Negative | 3003786 - 3006389 | 96500.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
