Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | C0Z19_13515 | Not Available | Negative | 2958197 - 2959186 | 36419.4 |
| ggdef domain-containing protein | C0Z19_13520 | Not Available | Positive | 2959381 - 2960388 | 37302.5 |
| peptidase m1 | C0Z19_13525 | Not Available | Positive | 2960933 - 2963107 | 79104.1 |
| hypothetical protein | C0Z19_13530 | Not Available | Negative | 2963082 - 2963531 | 16805.9 |
| sarcosine oxidase subunit gamma | C0Z19_13535 | Not Available | Negative | 2963564 - 2964190 | 22754.2 |
| sarcosine oxidase subunit alpha | C0Z19_13540 | Not Available | Negative | 2964180 - 2967206 | 109194.0 |
| sarcosine oxidase subunit delta | C0Z19_13545 | Not Available | Negative | 2967208 - 2967513 | 11554.6 |
| sarcosine oxidase subunit beta | C0Z19_13550 | Not Available | Negative | 2967539 - 2968783 | 45227.9 |
| l-serine ammonia-lyase | C0Z19_13555 | Not Available | Negative | 2968806 - 2970191 | 49287.5 |
| arac family transcriptional regulator | C0Z19_13560 | Not Available | Positive | 2970458 - 2971528 | 39156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
