Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | C0Z19_13410 | Not Available | Negative | 2936191 - 2937465 | 45811.9 |
| hypothetical protein | C0Z19_13415 | Not Available | Positive | 2937481 - 2937810 | 12278.0 |
| arac family transcriptional regulator | C0Z19_13420 | Not Available | Positive | 2937919 - 2938929 | 37340.2 |
| dna-binding protein | C0Z19_13425 | Not Available | Negative | 2938937 - 2940451 | 54620.0 |
| dtdp-glucose 4,6-dehydratase | C0Z19_13430 | Not Available | Positive | 2940529 - 2941284 | 26186.1 |
| lysr family transcriptional regulator | C0Z19_13435 | Not Available | Negative | 2941288 - 2942190 | 32536.4 |
| hypothetical protein | C0Z19_13440 | Not Available | Positive | 2942352 - 2942765 | 14655.7 |
| tetr family transcriptional regulator | C0Z19_13445 | Not Available | Negative | 2942792 - 2943433 | 22664.1 |
| glutathione s-transferase | C0Z19_13450 | Not Available | Positive | 2943535 - 2944167 | 23680.3 |
| anti-sigma factor | C0Z19_13455 | Not Available | Negative | 2944203 - 2944667 | 17200.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
