Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | C0Z19_13255 | Not Available | Positive | 2904665 - 2905603 | 34173.1 |
| hypothetical protein | C0Z19_13260 | Not Available | Positive | 2905638 - 2905973 | 12269.5 |
| cobalamin biosynthesis protein cobd | C0Z19_13265 | Not Available | Negative | 2906010 - 2906948 | 34487.1 |
| coa pyrophosphatase | C0Z19_13270 | Not Available | Negative | 2907063 - 2907743 | 24672.6 |
| 50s ribosomal protein l19 | C0Z19_13275 | Not Available | Negative | 2907847 - 2908227 | 14119.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | C0Z19_13280 | Not Available | Negative | 2908371 - 2909162 | 29218.0 |
| ribosome maturation factor rimm | C0Z19_13285 | Not Available | Negative | 2909165 - 2909854 | 24605.2 |
| 30s ribosomal protein s16 | C0Z19_13290 | Not Available | Negative | 2909945 - 2910199 | 9475.47 |
| hypothetical protein | C0Z19_13295 | Not Available | Positive | 2910419 - 2910919 | 17578.3 |
| radical sam protein | C0Z19_13300 | Not Available | Negative | 2910920 - 2912035 | 41464.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
