Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C0Z19_12805 | Not Available | Negative | 2810969 - 2811235 | 9387.15 |
| lysr family transcriptional regulator | C0Z19_12810 | Not Available | Negative | 2811421 - 2812500 | 38275.0 |
| formate dehydrogenase | C0Z19_12815 | Not Available | Positive | 2812652 - 2813167 | 18378.8 |
| formate dehydrogenase | C0Z19_12820 | Not Available | Positive | 2813164 - 2814726 | 54967.0 |
| formate dehydrogenase subunit alpha | C0Z19_12825 | Not Available | Positive | 2814741 - 2817689 | 107358.0 |
| formate dehydrogenase | C0Z19_12830 | Not Available | Positive | 2817736 - 2817978 | 9007.9 |
| fad-binding monooxygenase | C0Z19_12835 | Not Available | Negative | 2817991 - 2819805 | 65099.9 |
| hypothetical protein | C0Z19_12840 | Not Available | Positive | 2819999 - 2821891 | 68047.2 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | C0Z19_12845 | Not Available | Negative | 2822030 - 2822623 | 21919.4 |
| excinuclease abc subunit c | C0Z19_12850 | Not Available | Negative | 2822738 - 2824870 | 77757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
