Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | C0Z19_12755 | Not Available | Negative | 2799881 - 2800963 | 39268.9 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | C0Z19_12760 | Not Available | Negative | 2801023 - 2802105 | 40034.2 |
| hypothetical protein | C0Z19_12765 | Not Available | Negative | 2802306 - 2802911 | 21837.2 |
| dna gyrase subunit a | C0Z19_12770 | Not Available | Negative | 2803129 - 2805762 | 97212.5 |
| hypothetical protein | C0Z19_12775 | Not Available | Positive | 2806322 - 2806975 | 23246.7 |
| bifunctional 3-demethylubiquinol 3-o-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase | C0Z19_12780 | Not Available | Positive | 2807204 - 2807902 | 25544.6 |
| phosphoglycolate phosphatase | C0Z19_12785 | Not Available | Positive | 2807976 - 2808698 | 25553.6 |
| Tmrna,resume consensus sequence (at 84): agtaaccgcaaacgataa | Not Available | Not Available | Positive | 2808833 - 2809189 | Not Available |
| hypothetical protein | C0Z19_12795 | Not Available | Positive | 2809419 - 2809778 | 12332.7 |
| duf4172 domain-containing protein | C0Z19_12800 | Not Available | Negative | 2809775 - 2810902 | 40910.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
