Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 6-dehydrogenase | C0Z19_12705 | Not Available | Negative | 2789954 - 2791360 | 51284.1 |
| lipopolysaccharide assembly protein lapb | C0Z19_12710 | Not Available | Negative | 2791383 - 2792558 | 43970.4 |
| duf1049 domain-containing protein | C0Z19_12715 | Not Available | Negative | 2792609 - 2792902 | 10576.6 |
| hypothetical protein | C0Z19_12720 | Not Available | Negative | 2792960 - 2793265 | 10865.4 |
| integration host factor subunit beta | C0Z19_12725 | Not Available | Negative | 2793418 - 2793741 | 11823.3 |
| 30s ribosomal protein s1 | C0Z19_12730 | Not Available | Negative | 2793764 - 2795476 | 62082.8 |
| (d)cmp kinase | C0Z19_12735 | Not Available | Negative | 2795624 - 2796298 | 24185.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C0Z19_12740 | Not Available | Negative | 2796313 - 2797623 | 46762.5 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | C0Z19_12745 | Not Available | Negative | 2797635 - 2798570 | 32665.2 |
| histidinol-phosphate transaminase | C0Z19_12750 | Not Available | Negative | 2798654 - 2799766 | 39990.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
