Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase | C0Z19_12655 | Not Available | Positive | 2780413 - 2781357 | 33833.5 |
| enoyl-coa hydratase | C0Z19_12660 | Not Available | Negative | 2781450 - 2782289 | 29394.4 |
| deacetylase | C0Z19_12665 | Not Available | Negative | 2782330 - 2783253 | 33428.8 |
| hypothetical protein | C0Z19_12670 | Not Available | Negative | 2783382 - 2783576 | 7003.98 |
| lytic murein transglycosylase b | C0Z19_12675 | Not Available | Positive | 2783579 - 2784946 | 49522.6 |
| hypothetical protein | C0Z19_12680 | Not Available | Negative | 2785018 - 2785887 | 31119.7 |
| cysteine synthase b | C0Z19_12685 | Not Available | Negative | 2786328 - 2787230 | 32786.4 |
| competence protein come | C0Z19_12690 | Not Available | Negative | 2787437 - 2787820 | 13177.9 |
| adp-glyceromanno-heptose 6-epimerase | C0Z19_12695 | Not Available | Negative | 2787892 - 2788884 | 36995.8 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | C0Z19_12700 | Not Available | Negative | 2788960 - 2789991 | 36802.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
