Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | C0Z19_12605 | Not Available | Positive | 2768454 - 2770601 | 76055.1 |
| pimeloyl-coa dehydrogenase large subunit | C0Z19_12610 | Not Available | Positive | 2770708 - 2771916 | 44765.3 |
| pimeloyl-coa dehydrogenase small subunit | C0Z19_12615 | Not Available | Positive | 2771930 - 2773081 | 40868.8 |
| transcriptional regulator | C0Z19_12620 | Not Available | Negative | 2773161 - 2774099 | 33942.6 |
| hypothetical protein | C0Z19_12625 | Not Available | Negative | 2774279 - 2775154 | 29254.4 |
| transcriptional regulator | C0Z19_12630 | Not Available | Negative | 2775327 - 2775815 | 18462.9 |
| d-amino acid dehydrogenase small subunit | C0Z19_12635 | Not Available | Positive | 2775916 - 2777202 | 45807.1 |
| electron transfer flavoprotein subunit alpha | C0Z19_12640 | Not Available | Negative | 2777442 - 2778377 | 31534.8 |
| electron transporter rnfb | C0Z19_12645 | Not Available | Negative | 2778392 - 2779141 | 26587.7 |
| hypothetical protein | C0Z19_12650 | Not Available | Negative | 2779382 - 2780155 | 27720.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
