Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | C0Z19_12555 | Not Available | Negative | 2754937 - 2756625 | 61572.5 |
| histidine utilization repressor | C0Z19_12560 | Not Available | Negative | 2756748 - 2757443 | 26179.1 |
| histidine ammonia-lyase | C0Z19_12565 | Not Available | Negative | 2757465 - 2759009 | 53486.6 |
| hypothetical protein | C0Z19_12570 | Not Available | Positive | 2759583 - 2759786 | 7199.35 |
| lysr family transcriptional regulator | C0Z19_12575 | Not Available | Positive | 2760132 - 2761214 | 37950.3 |
| abc transporter atp-binding protein | C0Z19_12580 | Not Available | Positive | 2761348 - 2762052 | 25166.7 |
| luxr family transcriptional regulator | C0Z19_12585 | Not Available | Negative | 2762236 - 2762949 | 26676.1 |
| glycosyl transferase family 51 | C0Z19_12590 | Not Available | Positive | 2763805 - 2766942 | 114715.0 |
| csbd family protein | C0Z19_12595 | Not Available | Positive | 2767069 - 2767272 | 7223.31 |
| lysr family transcriptional regulator | C0Z19_12600 | Not Available | Negative | 2767420 - 2768322 | 33827.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
