Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C0Z19_12455 | Not Available | Negative | 2730345 - 2731259 | 32424.1 |
| hopanoid biosynthesis associated radical sam protein hpnj | C0Z19_12460 | Not Available | Negative | 2731267 - 2732688 | 54109.1 |
| glycosyl transferase | C0Z19_12465 | Not Available | Negative | 2732789 - 2733967 | 42249.1 |
| pyridoxal kinase | C0Z19_12470 | Not Available | Positive | 2734474 - 2735346 | 31908.5 |
| chemotaxis protein | C0Z19_12475 | Not Available | Negative | 2735427 - 2737229 | 61656.1 |
| branched chain amino acid abc transporter substrate-binding protein | C0Z19_12480 | Not Available | Positive | 2737734 - 2738882 | 40246.9 |
| fad-dependent oxidoreductase | C0Z19_12485 | Not Available | Positive | 2738998 - 2740170 | 42487.4 |
| lysr family transcriptional regulator | C0Z19_12490 | Not Available | Negative | 2740239 - 2741159 | 34746.7 |
| glutathione s-transferase | C0Z19_12495 | Not Available | Positive | 2741288 - 2741938 | 24115.9 |
| phosphoesterase | C0Z19_12500 | Not Available | Positive | 2742191 - 2744236 | 72825.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
